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Long-term inflammatory memory driver identified!

The researchers first gave a bout of psoriasis to mice when they were young. They discovered that about 10–15% of the memories that persisted a month later stuck around even to the end of the mouse’s life (~2 years). To see why these long-term memories lingered while their short-term counterparts faded within six months, they analyzed the DNA sequence characteristics within each of the memories by using a deep learning model customized by the third co-first author.

“When we compared the DNA sequences of short and long-term memory domains, they looked very similar in terms of the numbers and kinds of transcription factor binding sites,” says the author. “We realized we needed to develop a new metric that specifically captures memory persistence across time, not just total accessibility at any one point.”

Soto-Ugaldi’s adaptation, called PersistNet, quickly identified a telling trait: The longest lasting memory domains had an unusually high frequency of CpG dinucleotides—short DNA sequences of cytosine followed by guanine, which are known to play a key role in gene regulation. In fact, the model predicted that CpG density hardwires a timer into every memory domain: The more CpG’s, the longer the memory.

When they tested the prediction, that’s exactly what they found. “Looking across all 1,000 memory domains, we discovered that these nucleotide densities alone, and no other DNA sequence pattern, could distinguish how long each memory would linger,” says the author.

Back in the lab, the team discovered that these genetically wired densities enabled a host of epigenetic changes in memory domains, including DNA demethylation (the removal of a methyl group specifically found on CpG dinucleotides); the binding of transcription factors that prefer demethylated states; and the recruitment of a histone variant called H2A.Z, which preferentially seeks out demethylated sites and boosts chromatin accessibility while staving off future re-methylation. Together, these changes stabilized the open chromatin formation and its gene-priming activity. As the authors discovered, this structure could crucially be passed down across cellular generations, essentially keeping the doors open for life. Science Mission sciencenewshighlights.


One of the most puzzling aspects of common chronic inflammatory skin diseases such as psoriasis is how they become chronic. What allows an ongoing condition to stay dormant for months or even years, then seemingly spring back out of nowhere?

Mutation map reveals how amylin mutations influence type 2 diabetes

Researchers at the Institute for Bioengineering of Catalonia (IBEC) have produced a mutational map showing how mutations in amylin—a hormone that plays a key role in glucose regulation—affect its tendency to form toxic amyloid aggregates in the pancreas. This process is linked to the development of type 2 diabetes. While it was already known that certain mutations could alter this aggregation capacity, understanding of this process was fragmented and based on isolated studies. The research is published in the journal Nature Communications.

“For the first time, we can systematically map how thousands of mutations modulate amylin aggregation, bringing human genetics closer to molecular mechanisms,” says Benedetta Bolognesi, the principal investigator of the Protein Phase Transitions in Health and Disease group at IBEC, who is also the lead author of the study.

“We have created a map that allows us to anticipate the potential impact of these mutations in the population,” adds Marta Badia, a researcher in the same group and first author of the study. “We are not assessing toxicity, but rather the protein’s intrinsic propensity to form fibers. This is a first step, but an extremely necessary one.”

Newly discovered recessive neurodevelopmental disorder may be most prevalent ever

Researchers at the Icahn School of Medicine at Mount Sinai in New York have identified and described a previously unknown recessive neurodevelopmental disorder (NDD) that appears to be the most prevalent ever discovered. The condition is caused by changes in a small noncoding gene called RNU2-2. It is estimated to affect thousands of individuals in the United States and account for about 10% of all recessive NDD cases with a known genetic cause.

The work was done in collaboration with U.S. collaborators in the Undiagnosed Diseases Network led by colleagues at Stanford University and international collaborators in the United Kingdom, the Netherlands, Belgium, and Italy. The findings, published in the March 30 issue of Nature Genetics, provide long-awaited answers for many families and may inform future drug development.

The team found that the disorder is caused by a near-complete absence of a molecule called U2-2 RNA, which is produced by the RNU2-2 gene. Children with the condition typically inherit one altered copy of the gene from each parent, although sometimes changes arise spontaneously by genetic mutation. While the parents are unaffected, the combined effect on both copies of the gene in their children leads to disrupted brain development in their child.

Epigenetic regulation of serine biosynthesis by PHF8 during neurogenesis

Linking epigenetics and metabolism in neurogenesis!

Epigenetic regulation and metabolism are tightly coordinated during progenitor cell growth but the processes linking this crosstalk is not well understood.

The researchers examined in neural stem cells the role of PHF8, a histone demethylase whose mutations are linked to Siderius-Hamel syndrome, a rare neurodevelopmental disorder.

The authors show that PHF8 regulates neural progenitor proliferation by coordinating epigenetic and metabolic programs and drives serine biosynthesis by maintaining chromatin accessibility of serine synthesis genes.

They also demonstrate that loss of PHF8 disrupts metabolism, autophagy, and vesicle formation and its deficiency leads to DNA damage and halts neurogenesis in vivo. sciencenewshighlights ScienceMission https://sciencemission.com/Epigenetic-regulation-of-serine-biosynthesis


Progenitor proliferation during neurodevelopment requires tight coordination of epigenetic regulation and metabolism. However, the crosstalk between these processes remains poorly understood. To investigate this, we examine in neural stem cells the role of PHF8, a histone demethylase whose mutations are linked to Siderius-Hamel syndrome, a rare neurodevelopmental disorder. Through an integrated multi-omics approach — combining transcriptomics, epigenomics, and metabolomics — we identify PHF8 as a key driver of the serine biosynthesis pathway, safeguarding the intracellular serine pool essential for neural progenitor proliferation. PHF8 fine-tunes chromatin accessibility at promoters of metabolic genes, ensuring their activation during development. Loss of PHF8 disrupts amino acid metabolism, blocks autophagy, and hinders vesicle formation.

Can Humans REALLY Leave Earth? [Interstellar Spaceship]

If you want to know more about the @HP ZBook Ultra G1a Powered by an @AMD Ryzen™ AI MAX Pro 300 Series Processor, click the link below.
https://www.hp.com/us-en/workstations… Projects (Chrysalis, WFP, Sistema Stellare Proximum) https://www.projecthyperion.org/ My Research Booklet https://nollimedia.com/hyperion_bookl… My Merch: https://damilee.com/collections/gear Become a channel producer: https://ko-fi.com/damilee/tiers Music and Stock footage by Artlist (2 additional months free on any annual plan if you use my link): https://bit.ly/3GxTfQ6 Join the Discord Server: / discord JOIN MY NEWSLETTER: https://www.damilee.com/pages/newsletter DESK + ACCESSORIES: Ergonofis Sway Desk https://bit.ly/3W3sHNi Ergonofis Shift Desk https://bit.ly/3YtHzq4 Film Equipment Black Magic PCC 6K PRO: https://amzn.to/3YiAAz6 Insta360 RS ONE http://bit.ly/3HjifLy Sony FX30 https://amzn.to/3gDAqCw Laowa Probe Lens : https://amzn.to/3HOWvIK Sirui Night Walker https://amzn.to/40mVIbZ IPad Pro 13 Inches M4 https://amzn.to/40hH1a1 Hollyland MARS https://amzn.to/41GJKYt Hollyland Lark M2 https://amzn.to/3Xf9QiA Aputure Amaran RGB stick https://amzn.to/3A8gh18 RONIN RS-4 https://amzn.to/4f1o6F0 Small Rig COB lighs https://amzn.to/4fqkPip Edited With Davinci Resolve https://bit.ly/4hgUEMC Book Recommendations: https://damilee.com/pages/recommended… INSTAGRAM — / damileearch TWITTER — / damileearch LINKEDIN — / damilee TIKTOK — / damileearch WHO AM I: I’m Dami, a licensed Architect living in Vancouver, BC. I make videos about architecture, career, and creativity. WEBSITES https://www.damilee.com https://nollimedia.com/ Filmmaking by Raffaele di Nicola Raffaele di Nicola IG @nollistudio Special Thanks @TheNetworkHub Vancouver https://thenetworkhub.ca/ GET IN TOUCH: If you’d like to talk, I’d love to hear from you! Commenting on a video or tweeting @damileearch will be the quickest way to get a response from me, but if your question is very long, feel free to email me at [email protected]. I try my best to respond to the emails, but unfortunately, there just aren’t enough hours in the day! A NOLLISTUDIO/NOLLIMEDIA Production http://www.nollistudio.com @HPInc @AMD #InterstellarTravel #GenerationShip #SpaceArchitecture #SpaceColonization #FutureOfHumanity #SpaceExploration #Megastructures #Architecture #Engineering #SciFi #SpaceDesign #DeepSpace #HumanSpaceflight #SpaceHabitat #AsteroidMining #Interstellar #SpaceSettlement #FutureEngineering #ClosedLoopSystems #SpaceTechnology #ad #AMD #Ryzen #RyzenAI What would it actually take to leave Earth — not for a weekend on the Moon, but forever? This video tests three real generation-ship proposals against five brutal constraints: gravity, radiation, closed-loop life support, cultural continuity across 400 years, and the selection problem — choosing who gets to go. We break down Chrysalis (a 58 km modular ship that sheds stages like a rocket), Proximum (a civilization carved inside an asteroid), and WFP (a self-assembling micro-city based on MIT research). Along the way we confront governance without a homeworld, genetic bottlenecks, generational memory loss, and why shared rituals might matter more than engine specs. The answer isn’t one ship — it’s three radically different philosophies of what it means to be human in deep space.

Hyperion Projects (Chrysalis, WFP, Sistema Stellare Proximum)
https://www.projecthyperion.org/

My Research Booklet.
https://nollimedia.com/hyperion_bookl

My Merch:
https://damilee.com/collections/gear.

Become a channel producer:
https://ko-fi.com/damilee/tiers.

Music and Stock footage by Artlist (2 additional months free on any annual plan if you use my link):

A poorly “cleaned” brain increases the risk of psychosis

A new study from the University of Geneva points to the brain’s waste-clearance system — the glymphatic system — as a possible piece of the psychosis puzzle. In people with 22q11.2 deletion syndrome, a high-risk genetic condition, researchers found developmental differences in an MRI-derived marker linked to glymphatic function, along with associations to hippocampal excitation/inhibition balance and psychosis vulnerability.


A team from UNIGE shows that early alterations in the brain’s clearance system could contribute to vulnerability to psychosis.

How can we explain the onset of psychotic symptoms characteristic of schizophrenia? Despite their major and often irreversible impact on intellectual abilities and autonomy, the biological mechanisms that precede their emergence remain poorly understood. A team from the Department of Psychiatry at the Faculty of Medicine and the Synapsy Center for Neuroscience Research in Mental Health at the University of Geneva (UNIGE) provides new insight into this question. Early dysfunction of the glymphatic system, the network responsible for removing waste from the brain, could be a key vulnerability factor. This research has been published in Biological Psychiatry: Global Open Science.

Hallucinations and delusions are among the characteristic psychotic symptoms of schizophrenia spectrum disorders, which may also be accompanied by social withdrawal and cognitive decline. These disorders, considered neurodevelopmental conditions, most often emerge during adolescence or early adulthood and have an estimated prevalence of 0.5–3% in the general population.

Understanding protein motion could greatly aid new drug design

For many people, “protein” is the key element of a food order. However, beyond the preferred choice of meats or plant-based alternatives, proteins encompass a large class of complex biomolecules whose chemical structure is encoded in our genes. Proteins have critical functions in living cells; they help repair and build body tissues, drive metabolic reactions, maintain pH and fluid balance, and keep our immune systems strong.

To perform their important functions, many proteins have a dynamic molecular structure capable of adopting multiple conformations. For a long time, scientists have suspected that proteins don’t change shape at random. Instead, they seem to move according to deep, slow rhythms—like a building that sways gently in the wind rather than shaking violently.

Those slow rhythms guide how a protein bends, twists, and shifts between its different forms. If one could understand those rhythms, one might be able to predict—and even hurry along—the protein’s movements.

Energy crisis drives T cells to exhaustion in tumors

The immune system’s killer T cells do a commendable job of detecting and destroying cancer cells. But the harsh environment at the heart of tumors often saps them of their vitality, pushing them into a state of permanent lassitude called “terminal exhaustion.” The phenomenon accounts for why so many tumors resist routine immune clearance and even cancer immunotherapies devised to stimulate their lethal capabilities.

Terminal exhaustion is characterized by an accumulation of dysfunctional mitochondria—the bean-shaped energy generators in cells—and extensive genetic reprogramming that stalls proliferation and hobbles the cell-killing weaponry of T cells. Yet how mitochondrial dysfunction is linked to genetic reprogramming in the cells was unclear. No longer. Researchers in the journal Nature show that how the accumulation of useless mitochondria is linked to T cell exhaustion through a complex series of subcellular processes.

The researchers report in their paper that the glut of dysfunctional mitochondria enhances the activity of a cellular protein digesting machine, known as the proteasome, in T cells. The activated proteasome, they show, preferentially degrades mitochondrial heme-containing proteins.

As might be expected, this bias leads to quite the buildup of heme in the cells, resulting in the generation of a functionally distinct form of the molecule referred to as “regulatory heme,” which zips into the nucleus through a transporter named PGRMC2. There it binds to a transcription factor, a protein that regulates gene expression, causing its degradation. This kicks off a series of events that culminates in the activation of genetic programs known to induce terminal exhaustion.

The researchers show that genetic disruption of PGRMC2 abrogates this effect, keeping anti-tumor T cells in a functionally vibrant state, suggesting it is a potential drug target for the enhancement of T cell-activating cancer immunotherapies.

The researchers also examined how the pharmacological inhibition of the proteasome with an existing leukemia therapy, bortezomib, might affect CAR-T cells. Like bortezomib, CAR-T therapy is currently used to treat B cell acute lymphoblastic leukemia (B-ALL).

“We found that the transient and low-dose addition of bortezomib to CAR-T cell cultures during manufacturing reduces exhaustion-associated programs in the cells and induces durable reprogramming of their gene expression patterns to maintain them in a proliferative and functionally vibrant state,” said the author. ScienceMission sciencenewshighlights.

Mitochondria Delivery Method Rescues Parkinson’s in Mice

Scientists used red blood cells as membrane donors to encapsulate healthy mitochondria and send them into diseased cells, achieving improvements across multiple models and conditions [1].

The delivery problem

Mitochondrial diseases are a diverse group of disorders that arise when mitochondria malfunction. They are often caused by mutations in mitochondrial DNA (mtDNA) itself or in nuclear genes encoding mitochondria-related proteins.

Unraveling the secrets of telomerase, an enzyme linked to aging and cancer

A central question in molecular biology is how cells protect their chromosomes from damage during repeated cell division. At the heart of this protective process is an enzyme called telomerase. Now an international research team has mapped the three-dimensional structure of telomerase in the yeast Saccharomyces cerevisiae, a widely used model organism in genetics.

Using cutting-edge technology, the scientists were able to visualize the architecture of this complex enzyme in unprecedented detail, uncovering unexpected features that may explain how it functions.

This major discovery was the result of an international collaboration between Pascal Chartrand, a professor in the Department of Biochemistry and Molecular Medicine at Université de Montréal, and researchers from Université de Sherbrooke and the MRC Laboratory of Molecular Biology in the U.K. Their findings were recently published in Science.

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